@article{Dunker2008,
  author = "A.K. Dunker and C.J. Oldfield and J. Meng and P. Romero and J.Y. Yang and J.W. Chen and V. Vacic and Z. Obradovic and V.N. Uversky",
  title = "The unfoldomics decade: an update on intrinsically disordered proteins",
  journal = "BMC Genomics",
  year = "2008",
  volume = "9",
  number = "S2",
  pages = "S1",
  keywords = "protein disorder",
  pmid = ""
}

@inproceedings{Vacic2008,
  author = "V. Vacic and H. Jin and J-K. Zhu and S. Lonardi",
  title = "A probabilistic method for small {RNA} flowgram matching",
  booktitle = "Proceedings of Pacific Symposium on Biocomputing",
  year = "2008",
  volume = "13",
  pages = "75--86",
  keywords = "small rna 454",
  pmid="18229677"
}

@article{Jin2008,
  author = "H. Jin and V. Vacic and T. Girke and S. Lonardi and J-K. Zhu",
  title = "Small {RNA}s and the regulation of cis-natural antisense transcripts in {A}rabidopsis",
  journal = "BMC Molecular Biology",
  year = "2008",
  volume = "9",
  number = "",
  pages = "6",
  keywords = "small rna arabidopsis",
  pmid="18194570"
}

@article{Fu2007,
  author = "Z. Fu and X. Chen and V. Vacic and P. Nan and Y. Zhong and Jiang T",
  title = "{MSOAR}: a high-throughput ortholog assignment system based on genome rearrangement",
  journal = "Journal of Computational Biology",
  year = "2007",
  volume = "14",
  number = "9",
  pages = "1160--75",
  keywords = "comparative genomics ortholog assignment",
  pmid="17990975"
}

@article{Vacic2007b,
  author = "V. Vacic and V.N. Uversky and A.K. Dunker and S. Lonardi",
  title = "Composition {P}rofiler: a tool for discovery and visualization of amino acid composition differences",
  journal = "BMC Bioinformatics",
  year = "2007",
  volume = "8",
  number = "",
  pages = "211",
  keywords = "visual data mining",
  pmid="17578581"
}

@article{Vacic2007a,
  author = "V. Vacic and C.J. Oldfield and A. Mohan and P. Radivojac and M.S. Cortese and V.N. Uversky and A.K. Dunker",
  title = "Characterization of molecular recognition features, {MoRF}s, and their binding partners",
  journal = "Journal of Proteome Research",
  year = "2007",
  volume = "6",
  number = "6",
  pages = "2351--66",
  keywords = "protein interactions disorder",
  pmid="17488107"
}

@article{Sickmeier2007,
  author = "M. Sickmeier and J.A. Hamilton and T. LeGall and V. Vacic and M.S. Cortese and A. Tantos and B. Szabo and P. Tompa and J. Chen and V.N. Uversky and Z. Obradovic and A.K. Dunker",
  title = "Dis{P}rot: the database of disordered proteins",
  journal = "Nucleic Acids Research",
  year = "2007",
  volume = "35",
  number = "",
  pages = "D786--93",
  keywords = "protein disorder database",
  pmid="17145717"
}

@article{Mohan2006,
  author = "A. Mohan and C.J. Oldfield and P. Radivojac and V. Vacic and M.S. Cortese and A.K. Dunker and V.N. Uversky",
  title = "Analysis of molecular recognition features ({MoRF}s)",
  journal = "Journal of Molecular Biology",
  year = "2006",
  volume = "362",
  number = "5",
  pages = "1043--59",
  keywords = "protein interactions disorder",
  pmid="16935303"
}

@inproceedings{Fu2006,
  author = "Z. Fu and X. Chen and V. Vacic and P. Nan and Y. Zhong and T. Jiang",
  title = "A parsimony approach to genome-wide ortholog assignment",
  booktitle = "Proceedings of ACM Annual Conference on Research in Computational Molecular Biology, RECOMB'06",
  year = "2006",
  pages = "",
  keywords = "comparative genomics ortholog assignment",
  pmid=""
}

@article{Vacic2006,
  author = "V. Vacic and L.M. Iakoucheva and P. Radivojac",
  title = "Two {S}ample {L}ogo: a graphical representation of the differences between two sets of sequence alignments",
  journal = "Bioinformatics",
  year = "2006",
  volume = "22",
  number = "12",
  pages = "1536--7",
  keywords = "visual data mining sequence analysis",
  pmid="16632492"
}

@article{Vucetic2005,
  author = "S. Vucetic and Z. Obradovic and V. Vacic and P. Radivojac and K. Peng and L.M. Iakoucheva and M.S. Cortese and J.D. Lawson and C.J. Brown and J.G. Sikes and C.D. Newton and A.K. Dunker",
  title = "Disprot: a database of protein disorder",
  journal = "Bioinformatics",
  year = "2005",
  volume = "21",
  number = "1",
  pages = "137--40",
  keywords = "protein disorder database",
  pmid="15310560"
}