|
|
|
Abril, Josep F.
|
|
|
Adleman, Leonard
|
cryptography |
|
Agarwala, Richa
|
computational molecular biology |
|
Aho, Alfred V.
|
|
| Akutsu, Tatsuya
|
|
| Alexander, Kenneth S.
|
|
| Alizadeh, Farid |
computational biology |
| Allauzen, Cyril |
|
| Allex, Carolyn F. |
computational biology |
| Allison, LLoyd |
MML, multiple alignment and data compression |
| Alstrup, Stephen |
|
| Altman, Russ Biagio |
|
| Altschul, Stephen F. |
|
| Aluru, Srinivas |
computational biology |
| Amir, Amihood |
|
| Arslan Abdullah N. |
|
| Andersson, Arne |
|
| Apostolico, Alberto |
|
| Armen, Chris |
shortest superstring |
| Arge, Lars |
external memory algorithms |
| Arratia, Richard |
|
| Arnheim, Norm |
biology, computational molecular biology |
| Arvestad, Lars |
sequence alignment |
| Atallah, Mikhail J. |
parallel algorithms |
|
|
| Baeza-Yates, Ricardo A.
|
|
| Bafna, Vineet |
computational biology, approximation algorithms |
| Bailey, Timothy L. |
computational biology |
| Baldi, Pierre |
computational biology |
| Baker, Brenda S. |
duplication or near-duplication of code |
| Balasubramanian, K.
|
|
| Barton, Geoffrey
|
computational molecular biology |
| Batzoglou, Serafim
|
computational molecular biology |
| Benham, Craig
|
computational molecular biology |
| Beigel, Richard
|
dynamic text indexing |
| Beal, Marie-Pierre
|
|
| Benson, Gary
|
|
| Berger, Bonnie
|
computational molecular biology |
| Bergeron, Anne
|
computational molecular biology |
| Berman, Piotr
|
|
| Berstel, Jean
|
|
|
Blanchette, Mathieu
|
phylogeny |
|
Bloch, Martin
|
|
| Blum, Avrim L.
|
|
| Blumer, Anselm
|
|
| Bodlaender, Hans L.
|
sequence alignment, graphs |
| Bonet, Marie Luisa
|
|
| Bonizzoni, Paola
|
|
| Borodovsky, Mark
|
analysis of DNA and protein sequences |
| Bourque, Guillaume
|
|
| Boxer, Laurence
|
point set pattern matching, Hausdorff metric |
| Boyer, Robert Stephen
|
|
| Brazma, Alvis
|
computational molecular biology, machine learning, data mining |
| Brendel, Volker
|
computational molecular biology |
| Breslauer, Dany
|
parallel, suffix trees, dictionary matching |
| Brocchieri, Luciano
|
|
| Brodal, Gerth Stølting
|
approximate dictionary queries |
| Broder, Andrei
|
|
| Bruno, W. J.
|
computational molecular biology |
| Brutlag, Douglas L.
|
computational molecular biology |
| Bryant, David (mail)
|
phylogeny |
| Buhler, Jeremy
|
computational molecular biology |
| Burkhardt, Stefan
|
|
| Burge, Chris
|
computational molecular biology |
| Bussemaker, Harmen
|
computational molecular biology |
|
|
| Califano, Andrea
|
|
| Calinescu, Gruia
|
|
| Cantone, Domenico
|
string matching |
| Caprara, Alberto
|
sorting by reversal, combinatorial optimization |
| Cassaigne, Julien
|
combinatorics on words |
| Chaitin, G.J.
|
algorithmic information theory |
| Chao, Kun-Mao
|
|
| Charras, Christian
|
|
| Chen, Tim
|
DNA sequence assembling, sorting by reversal |
| Chor, Benny
|
|
| Cleary, John G.
|
text compression |
| Clote, Peter
|
computational biology |
| Cobbs, Archie L.
|
|
| Cole, Richard
|
|
| Colussi, Livio
|
|
| Corasick, M.J.
|
|
| Cormack, Gordon V.
|
compression (DMC), grammars, text retrieval |
| Cormode, Graham
|
|
| Cristofaro, Salvatore
|
string matching |
| Cryan, Mary
|
phylogeny |
| Crochemore, Maxime |
DAWG, text compression |
| Cummings, Larry J.
|
combinatorics on words |
| Cunto, Walter
|
|
| Cytron, Ron K.
|
|
| Czumaj, Artur
|
parallel algorithms |
|
|
| De Agostino, Sergio
|
text compression |
| Dancik, Vladimir
|
longest common subsequence |
| Delcher, Arthur L.
|
|
| Della Vedova, Gianluca
|
|
| Dessmark, Anders (mail)
|
|
| Donald, Bruce Randall
|
computational biology |
| Doolittle, Russel F.
|
|
| Dowe, David
|
MML, MDL, computational biology, compression |
| Dress, Andreas
|
|
| Durand, Dannie
|
computational biology |
|
|
| Edelkamp, Stefan
|
suffix trees |
| Egecioglu, Ömer
|
sequence aligmnent |
| Eggert, Martin (mail)
|
|
| Ehrenfeucht, Andrzej
|
|
| El-Mabrouk, Nadia
|
|
| Eppstein, David
|
|
| Evans, Patricia A.
|
|
|
|
| Faloutsos, Christos
|
multimedia and medical databases, data mining, text retrieval |
| Farach, Martin
|
matching on compressed strings, plylogeny |
| Faro, Simone
|
string matching |
| Fayyad, Usama
|
data mining and knowledge discovery |
| Fernández-Baca, David
|
phylogeny |
| Ferragina, Paolo
|
text indexing and external memory data structures |
| Ferenczi, Sébastien
|
|
| Ferretti, Claudio
|
|
| Ferretti, Vincent
|
|
| Fischetti, Vincent A.
|
computational biology (alpha-helix, coiled-coil, 7 residue periodicity) |
| Flajolet, Philippe |
analysis of algorithms |
| Fleischer, Rudolf
|
episode matching |
| Fisher, Michael J.
|
|
| Florea, Liliana
|
computational biology |
| Fraenkel, Aviezri
|
codes, combinatoric on words |
| Franek, Frantisek
|
|
| Fraser, C.B. (mail)
|
subsequences an supersequences |
| Fredriksson, Kimmo
|
computational biology and combinatorial
(rotation invariant) pattern matching |
| Friedman, Nir
|
computational biology |
| Fu, James Jianghai
|
|
| Fuellen, Georg
|
phylogeny, multiple sequence alignment |
|
|
| Gal, Anna
|
|
| Galil, Zvi
|
|
| Gascuel, Olivier
|
|
| Gasieniec, Laszek
|
|
| Garzon, Max
|
molecular computing, cellular automata |
| Gelfand, Mikhail S.
|
|
| Giancarlo, Raffaele
|
|
| Giegerich, Robert
|
|
| Gilbert, David
|
|
| Gillett, Will
|
|
| Gopalakrishnan, Vanathi
|
computational biology |
| Goldberg, Debra S.
|
computational biology |
| Goldberg, Leslie Ann
|
|
| Goldberg, Mark
|
scs, string assembly |
| Goldberg, Paul W.
|
|
| Gonnet, Gaston H.
|
|
| Gopal, Burra
|
Glimpse, Harvest |
| Gorodkin, Jan
|
|
| Gotoh, O.
|
|
| Grossi, Roberto
|
|
| Guerra, Concettina
|
|
| Guimarães, Katia S.
|
|
| Gupta, Sandeep K.
|
|
| Gusfield, Dan
|
|
|
|
| Hakata, Koji
|
|
| Hallett, Michael
|
|
| Hanks, Liz
|
|
| Hannenhalli, Sridhar
|
sorting by reversal, protein folding |
| Hariharan, R. (mail)
|
|
| Harris, Nomi
|
|
| Hart, William E.
|
|
| Haussler, David
|
|
| Heber, Steffen
|
|
| Hein, Jotun
|
|
| van Helden, Jacques |
|
| Hendy, Michael
|
|
| Hermann, Miki
|
term rewriting systems |
| Heumann, K.
|
|
| Hirsh, Haym
|
|
| Hirschberg, Dan
|
lcs, parallel, data compression, trees, breakpoints |
| Hirao, Masahiro
|
compressed pattern matching, optimal pattern discovery |
| Holub, Jan
|
approximate string matching, finite automata |
| Hopcroft, John E.
|
|
| Horspool, R. Nigel
|
text compression |
| Horton, Paul
|
|
| Hoshino, Hiromasa
|
subsequence automata, DASG, CDAWG, optimal pattern
discovery |
| Huang, X.
|
sequence analysis |
| Huerta, M.
|
String Matching, Suffix tree, Computational Biology |
| Hubbell, Earl
|
sequence analysis |
| Hughey, Richard
|
computational biology |
| Hunt, James W.
|
|
| Hume, A.
|
|
| Huson, Daniel H.
|
phylogenetic trees |
|
|
| Idury, Ramana M.
|
|
| Iliopoulos, Costas S.
|
covering, string regularities |
| Ilie, Lucian
|
combinatorics on words, formal languages and automata theory |
| Imai, Hiroshi
|
LCS, multiple sequence alignment |
| Indyk, Piotr
|
inverse pattern matching |
| Inenaga, Shunsuke
|
CDAWG, DAWG, suffix tree |
| Irving, Rob W.
|
subsequences an supersequences, genome rearrangement |
| Istrail, Sorin
|
|
| Italiano, Giuseppe F.
|
dynamic programming, graphs |
|
|
| Jacobson, Guy
|
|
| Jacquet, Philip
|
|
| Jansson, Jesper
|
|
| Jiang, Tao
|
computational biology, approximation algorithms, complexity |
| Jonassen, Inge
|
computational biology, pattern matching and discovery |
| Jokinen, P.
|
|
| Just, Winfried
|
computational biology |
|
|
| Kannan, Sampat
|
|
| Kahn, Ari
|
|
| Kao, Ming-Yang
|
|
| Karp, Richard
|
|
| Karpinski, Marek
|
parallel algorithms, randomization |
| Karlin, Samuel
|
computational molecular biology |
| Karkkainen, Juha
|
suffix trees, suffix arrays, approximate matching, LZ parsing, 2D matching |
| Kasif, Simon
|
|
| Kása, Zoltán
|
|
| Kearney, Paul
|
|
| Kececiouglu, John D.
|
multiple alignment, genome rearrangement |
| Kedem, Zvi M.
|
parallel algorithms |
| Keogh, Eamonn
|
time series, time warping, similarity |
| Kent, Jim
|
computational biology |
| Kibler, Dennis F.
|
computational biology, data mining, machine learning |
| Kida, Takuya
|
pattern matching in compressed texts |
| Kilpelainen, Pekka
|
data mining |
| Kim, Dong Kyue
|
|
| Kim, Jong Yong
|
|
| Kim, Sun
|
pattern matching, sequence assembly |
| King, Valerie
|
|
| Kirchner, Claude
|
term rewriting systems |
| Kirchner, Hélčne
|
term rewriting systems |
| Klein, Shmuel Tomi
|
|
| Kleinberg , Jon
|
computational biology |
| Knecht, Lukas
|
|
| Knight, James R.
|
|
| Knuth, Donald E.
|
|
| Kolar, Josef
|
|
| Kolpakov, Roman
|
combinatorics on words, pattern matching |
| Koonin, Eugene V.
|
computational molecular biology |
| Korostensky, Chantal
|
computational molecular biology |
| Komatsoulis, George
A.
|
DNA restriction maps, alignments |
| Kosaraju, Rao S.
|
tree pattern matching, suffix trees, data compression |
| Krogh, Anders
|
|
| Kruskal, Joseph B.
|
|
| Kucherov, Gregory
|
matching with don't cares, rewriting systems |
| Kurtz, Stefan
|
approximate pattern matching, functional programming |
|
|
| Lagergren, Jens
|
|
| La Poutré, Han
|
|
| Lancia, Giuseppe
|
|
| Landau, Gad M.
|
|
| Laporte, Eric
|
|
| Larsson, Jesper
|
suffix trees, text compression |
| Lathrop, Richard H.
|
computational biology |
| Lawler, Eugene L.
|
|
| Lecroq, Thierry
|
exact string matching |
| Lee, Jae Kyun
|
|
| Leidner, Jochen
|
information extraction, linguistic applications of FSTs |
| Lengauer, Thomas
|
|
| Lenhof, Hans-Peter
|
|
| Lenzini, Gabriele
|
phylogeny |
| Lesk, Arthur M. (mail)
|
|
| Leung, Ming-Ying
|
computational biology |
| Lewenstein, Moshe
|
computational biology |
| Li, Ming
|
SCS, LCS, computational biology, Kolmogorov complexity |
| Li, Wentian
|
computational molecular biology |
| Liu, Jun
|
computational molecular biology |
| Lingas, Andrzej
|
|
| Lipman, David J.
|
|
| Lyngsř, Rune Bang
|
|
| Lonardi, Stefano
|
text compression, statistical sequence analysis |
| Loewenstern, David
|
|
| Love, Lorna
|
Suffix binary search trees and suffix arrays |
| Luccio, Fabrizio
|
|
|
|
| Ma, Bin
|
|
| Maaß, Moritz G.
|
|
| Maier, D.
|
|
| Mäkinen, Veli
|
|
| Manber, Udi
|
WebGlimpse, NetShell, Harvest, Glimpse, agrep |
| Manduchi, Elisabetta
|
|
| Mannila, Heikki
|
data mining |
| Mĺnsson, Marianne
|
|
| Mantaci, Sabrina
|
|
| Manzini, Giovanni
|
data compression |
| Marathe, Madhav
|
|
| Marsan, Laurent
|
motifs extraction |
| Matias, Yossi
|
|
| Mauri, Giancarlo
|
|
| Masek, W.J.
|
|
| Matsumoto, Tetsuya
|
pattern matching in compressed texts, optimal pattern discovery from textual data |
| McCreight, Edward M.
|
|
| Mehlhorn, Kurt
|
|
| Meidanis, Joao
|
|
| Melichar, Borivoj
|
|
| Mewes, H.W.
|
|
| Meyer, Folker
|
PCR-Primer selection and prediction, GeneFisher |
| Meyer auf der Heide, Friedhelm
|
|
| Michailidis, Panagiotis
|
parallel approximate text searching |
| Mignosi, Filippo
|
|
| Miyazaki, Satoru
|
|
| Miyazaki, Masamichi
|
|
| Miller, Webb
|
sequence alignment, computational biology |
| Mironov, Andrey A.
|
|
| Mitarai, Shuichi
|
compressed pattern matching, pattern matching, genome informatics |
| Moffat, Alistair
|
text compression information retrieval |
| Mohri, Mehryar
|
|
| Moore, J.S.
|
|
| Moreau, Pierre-Etienne
|
compilation of term rewriting systems |
| Morishita, Shinichi
|
association rules, computational molecular biology |
| Morris, J.H.
|
|
| Moret, Bernard
|
|
| Mouchard, Laurent
|
covering, string regularities, computational biology |
| Munro, Ian J.
|
space efficient suffix trees |
| Musser, David R.
|
generic programming, STL, string searching |
| Muth, Robert
|
|
| Muthukrishnan, S. Muthu
|
|
| Myers, Eugene W.
|
sequencing, similarity searches |
|
|
| Nadeau, Joseph H.
|
|
| Nakai, Kenta
|
|
| Naor, Dalit
|
parametric multiple alignment, partial digest problem |
| Narasimhan, Giri
|
|
| Navarro, Gonzalo
|
multiple, approximate and structured, text indexing |
| Ng, See-Kiong
|
computational molecular biology, sorting by reversal |
| Needleman, S.B.
|
|
| Nevill-Manning, Craig
|
hierarchical grammar inference, compression |
| Newberg, L.A.
|
|
| Nicodeme, Pierre
|
multiple alignment, reg expression and prosite |
| Nilsson, Stefan
|
|
|
|
| Odlyzko, Andrew
|
|
| Östlin, Anna
|
phylogeny |
| Ohlebusch, Enno
|
approximate, term rewriting systems, pattern languages |
|
|
| Paige, Robert
|
|
| Parida, Laxmi
|
|
| Park, Kunsoo
|
approximate, two-dimensional |
| Park, SangHyun
|
retrieval of similar subsequences in sequence databases |
| Parsons, Rebecca
|
computational biology |
| Pachter, Lior
|
computational biology |
| Paterson, Mike S.
|
longest common subsequence, computational biology |
| Pavesi, Giulio
|
computational biology, pattern discovery |
| Pedersen, Christian N. S.
|
|
| Pe'er, Itsik
|
genome rearrangement problems |
| Pearson, William R.
|
FASTA, SSEARCH, protein evolution, sequence similarity |
| Perrin, Dominique
|
codes, automata |
| Pevzner, Pavel A.
|
computational molecular biology |
| Phillips, Cynthia A.
|
|
| Pinzon, Yoan J.
|
approximate string matching, computational molecular biology |
| Piotrow, Marek
|
parallel, shortest superstring |
| Pisanti, Nadia
|
computational Molecular Biology |
| Plandowski, Wojciech
|
|
| Pollastri, Gianluca
|
protein structure prediction |
| Porat, Ely
|
Pattern Matching, Data Compression |
| Poon, C.K.
|
|
| Pratt, Vaughan
|
see Knuth, Morris |
| Preparata, Franco
|
|
| Przytycka, Teresa |
Maximum Common Subtree, Computational Molecular Biology |
|
|
| Rabin, Michael O.
|
randomized pattern matching |
| Raffinot, Mathieu
|
DAWG |
| Rauhe, Theis
|
|
| Ravi, R.
|
sequence alignment |
| Regnier, Mireille
|
|
| Reid, James F.
|
string covering, 2D matching, occlusion |
| Reinert, Gesine
|
|
| Reinert, Knut
|
multiple sequence alignment |
| Restivo, Antonio
|
|
| Rick, Claus
|
|
| Rigoutsos, Isidore
|
computational biology |
| Ringeissen, Christophe
|
term rewriting systems |
| Risvik, Knut Magne
|
scalable pattern matching, search engine technology |
| Rivals, Eric
|
compression and analysis of genetic sequences |
| Rivest, Ronald L.
|
cryptography and security |
| Ryzl, Martin (mail)
|
|
| Rodeh, Michael
|
|
| Robin, Gabriel
|
phylogeny |
| Rocke, Emily
|
|
| Rozenberg, Grzegorz
|
|
| Rusinowitch, Michael
|
|
| Ruzzo, Walter L.
|
|
| Rytter, Wojciech
|
|
|
|
| Sadakane, Kunihiko
|
data compression, suffix arrays |
| Sagot, Marie-France
|
computational biology |
| Salemi, Sergio
|
|
| Salvy, Bruno
|
analysis of algorithms |
| Salzberg, Steven
|
computational biology and machine learning |
| Sahinalp, Suleyman Cenk
|
compression, parallel, approximate |
| Sandak, Bilha
|
computational biology |
| Sankoff, David
|
phylogeny, genome rearrangement |
| Satta, Giorgio
|
computational linguistics |
| Schaffer, Alejandro A.
|
|
| Schiex, Thomas
|
|
| Schbath, Sophie
|
statistical analysis of biological sequences |
| Schleiermacher, Chris
|
|
| Schmidt, Jeanette
|
computational biology, probabilistic analysis, string comparisons |
| Schwikowski, Benno
|
tree alignments |
| Searls, David
|
computational biology |
| Seiferas, Joel
|
|
| Sedgewick, Robert
|
|
| Segal, Eran
|
computational biology |
| Segre, Alberto Maria
|
computational biology |
| Sellers, Peter H. (mail)
|
|
| Selznick, Sanford
|
|
| Setubal, Joăo Carlos
|
|
| Shasha, Dennis
|
|
| Shamir, Ron
|
|
| Sharan, Roded
|
sequencing by hybridization |
| Shallit, Jeffrey O.
|
|
| Sheinwald, Dafna
|
|
| Shibata, Yusuke
|
pattern matching in compressed texts |
| Shibuya, Tetsuo (mail)
|
multiple sequence alignment, suffix trees |
| Shinohara, Ayumi
|
pattern matching in compressed texts |
| Skyum, Sven
|
|
| Sjolander, Kimmen
|
|
| Siggia, Eric
|
|
| Sim, Jeong Seop
|
|
| Simanek, Milan
|
|
| Simon, Imre
|
|
| Simpson, Jamie
|
squares in binary words |
| Slonim, Donna
|
|
| Slutzki, Giora
|
|
| Smyth, William F.
|
covers, periods, repetitions |
| Singh, Mona
|
|
| Sinha, Saurabh
|
|
| Soldano, Henri
|
|
| Sorkin, Gregory B.
|
|
| Spang, Rainer
|
|
| Speed, Terry
|
|
| Staden, Rodger
|
|
| Steel, Mike
|
|
| Stege, Ulrike
|
|
| Stein, Clifford
|
|
| Stelling, Paul
|
|
| Stephen, Graham A.
|
|
| Storer, Jim A.
|
data compression, LZ parsing, 2D matching, SCS, parallel |
| Stormo, Gary D.
|
|
| Stoye, Jens
|
multiple sequence alignment, repeats |
| Sunday, D.M.
|
|
| Sutinen, Erkki
|
|
| Sumazin, Pavel
|
|
| Swanson, Kurt
|
|
| Sweedyk, Elisabeth
|
|
| Szymanski, Thomas G.
|
|
| Sze, Sing-Hoi
|
|
| Szpankowski, Wojciech
|
avg case analysis, multimedia compression, analytical inform. theory |
|
|
| Tang, Haixu
|
|
| Tarhio, Jorma
|
approximate, information retrieval, compression |
| Takeda, Masayuki
|
|
| Tavaré, Simon
|
phylogeny, statistic analysis |
| Toivonen, Hannu
|
knowledge discovery and data mining |
| Tompa, Martin
|
|
| Träff, Jesper Larsson
|
|
| Tran, Nicholas Q.
|
sorting by reversal |
| Tronicek, Zdenek
|
DASG, searching subsequences, finite automata |
|
|
| Ukkonen, Esko
|
|
|
|
|
Valiente, Gabriel
|
exact and approximate graph matching |
| Vergara, John Paul C.
|
sorting by reversal |
| Viari, Alain (mail)
|
|
| Vilo, Jaak
|
string-based machine learning algorithms |
| Vincent, Berry
|
phylogenetic trees |
| Vingron, Martin
|
multiple sequence alignment |
| Vishkin, Uzi
|
|
| Vitello, Robert J.
|
Profiling, and case-based reasoning applied to criminal investigations |
| Vitter, Jeff
|
|
| Vo, Phong
|
|
|
|
| Wagner, R.A.
|
|
| Wang, Jason T. L.
|
pattern discovery, computational biology, information retrieval on www |
| Wang, Lusheng
|
multiple sequence alignment, approximation algorithms |
| Warnow, Tandy J.
|
|
| Wareham, H. Todd
|
sequence (tree) alignment, consensus, (parameterized) computational complexity |
| Waterman, Michael S.
|
computational biology, sequence alignment, local alignment, physical maps |
| Watson, Bruce
|
exact (keyword & regular), automata, regular expressions, C++ & Java |
| Weiner, Peter
|
|
| Weisser, Deborah K.
|
|
| Wilf, Herbert
|
|
| Witten, Ian H.
|
text compression |
| Wong, A.K.C.
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| Workman, Christopher
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| Wyner, Aaron D.
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data compression, information theory |
| Wu, Sun
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pattern matching, IR systems, AGREP, GLIMPSE, GAIS |
| Wu, Thomas D.
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computational biology |
| Wunsch, C.D.
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| Yakhini, Zohar
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| Yao, Andrew C.
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| Yao, Frances F.
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| Yianilos, Peter N.
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| Yokoo, Hidetoshi
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data compression |
| Yona, Golan
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analysis of protein sequences and structures |
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| Zhang, Louxin
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| Zhang, Michael Q.
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| Zhang, Weixiong
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| Zhang, Kaizhong
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| Zhang, Zheng
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| Zhou, Xianghong
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| Ziviani, Nivio
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| Zuker, Michael
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