1. S. Bozdag, T.J. Close and S. Lonardi, "A Compartmentalized Approach to the Assembly of Physical Maps", Proceedings of IEEE International Symposium on Bioinformatics & Bioengineering (BIBE'07), pp. 218-225, Boston, MA, 2007. (Acceptance rate: 13%).
2. S. Bozdag, T. J. Close, S. Lonardi, "Computing the minimal tiling path from a physical map by integer linear programming", submitted to Workshop on Algorithms in Bioinformatics (WABI’08).
3. S. Bozdag, T. J. Close, S. Lonardi, "A pre-clustering approach to the assembly of physical maps", in preparation.
4. S. Bozdag, T. J. Close, S. Lonardi, "The distribution of genes and its correlation to GC content in the genomes of Oryza sativa and Arabidopsis thaliana", in preparation.
5. K. Madishetty, P. Condamine, S. Bozdag, M. Moscou, J. Svensson, J. Zheng, S. Wanamaker, P. Bhat, E. Rodriguez, H. Walia, J. Reznik, H. Le, M. C. Luo, T. Jiang, S. Lonardi, H. Witt, F. You, A. Kleinhofs, N. Stein, L. Cooper, K. Gill, G. Muehlbauer, R. Wise, T. J. Close, "Towards a physical map of the barley gene space", in preparation.
1. S. Bozdag, T. J. Close, S. Lonardi, “A Compartmentalized Approach to the Assembly of the Physical Maps”, Poster in Plant and Animal Genomes XVI Conference, 2008.
2. Y. Ma, H. Witt, R. Naderi,
F. M. You, C. X. Wang, K. Madishetty, J. T. Svensson, J. Zheng, P. Condamine,
R. Ashgar, S. Wanamaker, P. Bhat, M. Moscou, E. Rodriguez, H. Walia, J.
Resnik, S. Bozdag, G. J. Muehlbauer, S. Lonardi, T. J.
Close, M.C. Luo, “Updates on Contig Assembly with Gene-Containing
BACs of Barley”, Poster in Plant and Animal Genomes XVI Conference,
2008.
3. K. Madishetty, P. Condamine,
M. Moscou, J. T. Svensson, J. Zheng, S. Wanamaker, P. Bhat, E. Rodriguez,
H. Walia, S. Bozdag, J. Resnik, H. Le, S. Heinen, G. H.
Muehlbauer, M.C. Luo, T. Jiang, S. Lonardi, H. Witt, F. You, T. J. Close,
“Progress on physical mapping of the gene-space of barley”,
Abstract in Plant and Animal Genomes XV Conference, 2007.
4. Y. Ma, H. Witt, R. Naderi,
F. M. You, C. X. Wang, K. Madishetty, J. T. Svensson, J. Zheng, P. Condamine,
R. Ashgar, S. Wanamaker, P. Bhat, M. Moscou, E. Rodriguez, H. Walia, J.
Resnik, S. Bozdag, G. J. Muehlbauer, S. Lonardi, T. J.
Close, M.C. Luo, “Contig assembly of gene-containing BACs
of barley”, Poster in Plant and Animal Genomes XV Conference,
2007.
5. J. T. Svensson, K. Madishetty, J. Zheng, Jin Xu, P. Condamine, R. Ashgar, S. Wanamaker, P. Bhat, M. Moscou, E. Rodriguez, H. Walia, J. Resnik, H. Le, S. Bozdag, H. Witt, F. You, N. Rostoks, R. Waugh, N. Stein, R. Varshney, A. Graner, M.C. Luo, X. Cui, T. Jiang, S. Lonardi, T. J. Close, “Connecting the barley genetic and physical maps for 1000 abiotic stress genes”, Abstract in Plant and Animal Genomes XIV Conference, 2006.